CDS

Accession Number TCMCG057C19034
gbkey CDS
Protein Id XP_018483220.1
Location complement(join(28893324..28893534,28893629..28893852,28893962..28894222,28894314..28894424,28894561..28895295,28895375..28895524,28895669..28895754,28895837..28896060,28896137..28896756,28896758..28897003))
Gene LOC108854209
GeneID 108854209
Organism Raphanus sativus

Protein

Length 955aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018627718.1
Definition PREDICTED: LOW QUALITY PROTEIN: DNA repair endonuclease UVH1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA repair endonuclease
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10848        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03420        [VIEW IN KEGG]
ko03460        [VIEW IN KEGG]
map03420        [VIEW IN KEGG]
map03460        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000014        [VIEW IN EMBL-EBI]
GO:0000109        [VIEW IN EMBL-EBI]
GO:0000110        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000712        [VIEW IN EMBL-EBI]
GO:0000724        [VIEW IN EMBL-EBI]
GO:0000725        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003684        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004520        [VIEW IN EMBL-EBI]
GO:0004536        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006289        [VIEW IN EMBL-EBI]
GO:0006296        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0033683        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0036297        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051304        [VIEW IN EMBL-EBI]
GO:0051307        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901255        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]
GO:1990391        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGCTGAAATTTCATCAACAGATCATATCAGACCTTCTCGAAGACTCCAACGGCGGACTAGTAATCCTCTCTTCCGGCCTCTCCCTCTCTAAGCTAATCGCTTCTCTCCTCATCCTCCACTCTCCTTCCCAAGGAACCTTACTCCTCCTCCTCTCCCCCGCCTCCCAATCCCTCAAATCAAGAATCCTCCACCAACTCTCCTCCCTCGATTCCCCTCCCCCGACGGAGATCACCTCCGACCTTCCGGCGAACCACCGCCACTCCCTCTACTCCTCCGGCAACCCTTTCTTCATCACGCCGCGGATCCTAATCGTCGATCTCCTCACCCAGCGCATCCCACTCTCCTCCCTCGCCGGAATCTTCGTCCTCAACGCTCACTCCCTCTCCGAGACCTCCACCGAGGCCTTCATCGTCCGGATCGTCAAATCCCTAAACGCCTCCGCCTACGTCCGCGCCTTCTCCGATAGACCGCAGGCCATGGTCTCCGGCTTCGCCAAGACGGAGCGGACCATGCGCGCTCTCTTCCTCCGCCGGCTCCACCTGTGGCCCAGGTTTCAGCTGGACGTCTCCCAGGAGCTCGAGAGGGAGCCGCCTGAGGTTGTTGATATAAGAGTATCCATGTCGAATCACATGGTGGGGATACAGAAAGCTATCGTTGAAGTGATGGACGCGTGTCTCAAGGAGATGAGGAAGACGAATAAGGTGGATGTGGATGATTTGACTGTGGAGAGTGGTTTGTTCAAGTCATTTGATGAGATTGTGAGGAGGCAGCTTGATCCCATTTGGCATACTCTTGGGAAGAGAACCAAGCAGCTTGTTTCTGATTTGAAGACTTTGAGGAAGTTGCTTGATTATCTTGTTAGGTATGATGCTGTGAGTTTTCTCAAGTTTTTGGATACGCTCAGGGTGGCGGAGAGCTATCGATCTGTTTGGTTGTTTGCAGAGTCGAGTTATAAAATATTTGATTTTGCTAAGAAACGAGTGTACCGGCTTATCAAGGCAAGTGAGGTTAAGTCGAAAGAACATGTTAAGAATACAAGTGGTAAAAAGAGAAAGTTAAAGGGTGATAGTGCCTCTGTAGATGCAGTTGGTGGTGCAACGGCTAAGAATGGGGATTCTGGAGTTGTTATTGAAGAAGTTCTGGAAGAGGCACCCAAATGGAAAGTCTTACGTGAGATTTTATTAGAGACACAAGAAGAAAGAGAAAAACAGACTCTCTCTGAGGAAGACAATAGTGACAACAATGGAATGGTTCTTGTGGCTTGCAAAGATGAACGTTCCTGCATGCAGCTTGAAGATTGCATCACAAACAATCCACATAAGGTAATGCGAGAAGAGTGGGAAATGTACCTGCTGAGCAAAATTGAGATCCGCAATGTGCAGACACCTCAAAAGAAGAAACAAAAGACTCCCAAGGGTTTCGGGATTCTTGATGGAGTAGTTCCTGTGACTACAATACAGAGCTCGGAGGGTAGCAGTGTTTGCAGACAAGAGCATGAGGCTCTTATGGCTGCTGCATCCTCTATCCGTAAGCTTGGGAAGACGACTGCTTCTGAAAATAATAATCCAGAGGCTCAAGTTGATAAGGCTTCCAGTACCAAAGGAAAGGCTAAGAAGGAGTCATCAAATCTTCGGAGATCCATAAGAAGTTGCAGTAAGAAAAAGACGAACAGTGAACCTGAAATAGTAGTAACAGGCTCAGAAAATGAAGAAAAGGTTAGTGAAGCGAGCACATCAGACCCTCGAGAAGACAGTGATGTTCCCCCAAACGGTGCTAAGAAGCTACCGCCTGTGCATTTTTATGCCTTAGAAAGCGATCAGCCTATACTAGATGTCTTGAAACCGTCTGTGATCATTGTCTACCACCCTGACATGAGTTTCGTCAGAGAAATTGAGGTGTACAAAGCAGAGAACCCTCTGAAAAAGCTGAAAGTTTATTTTCTTTTCTATGATGAGTCTACAGAAGTGCAGAAGTTCGAAGCAAGCATACGCCGCGAAAATGGAGCCTTTGAATCATTGATTAGGCAGAAGTCTTCTATGATGATTCCCGTTGATCAGGATGGGCTTTGCATGGGGTCGAACTCATCTACAGAGTATCCAGCTTCAAGTACTCAAAACTCATTAACCCGAAAAGCAGGTGGAAGAAAGGAAATTGAAAAAGAAACACAGGTAATAGTTGATATGAGGGAGTTCATGAGTAGCCTACCAAATGTTCTTCACCAGAAAGGCATGAAGATAATACCTGTTACACTAGAGGTCGGCGACTATATCCTATCTCCTTCAATATGCGTGGAGAGAAAGAGCATTCAAGATCTCTTTCAAAGCTTCACCTCAGGTCGTTTGTTCCACCAAGTCGAAATGATGTCCCGGTATTACAGAATACCCGTTCTTCTCATCGAGTTCTCTCAAGACAAAAGCTTCTCCTTTCAGTCTGCGAATGATATATCAGATGATGTGACACCATATAACATCATATCAAAACTATCATTGCTGGTTCTGCATTTTCCTCGGTTACGGATATTATGGTCTCGAAGTCTCCATGCGACCGCTGAGATCTTCACCACCTTAAAATCAAACCAAGACGAGCCCGATGAAACCCGGGCAATAAGAGTTGGTGTGCCTTCAGAAGAGGGTATCATAGAAAATGACATCAGAGCCGAGAACTATAACACATCAGCAGTAGAGTTTCTTAGAAGGCTTCCTGGAGTTTCAGACGCTAATTACAGATCGATAATGGAGAAATGTAAGAGCTTATCTGAGCTCGCGTCTTTGCCTGTGGAGGAATTAGCAGAAGTCATGGGTGGTCAGAAAGTTGCTAAGAGTCTCAGAGAGTTTCTTGACGCCAAGTATCCAACTTTGCTTTAA
Protein:  
MALKFHQQIISDLLEDSNGGLVILSSGLSLSKLIASLLILHSPSQGTLLLLLSPASQSLKSRILHQLSSLDSPPPTEITSDLPANHRHSLYSSGNPFFITPRILIVDLLTQRIPLSSLAGIFVLNAHSLSETSTEAFIVRIVKSLNASAYVRAFSDRPQAMVSGFAKTERTMRALFLRRLHLWPRFQLDVSQELEREPPEVVDIRVSMSNHMVGIQKAIVEVMDACLKEMRKTNKVDVDDLTVESGLFKSFDEIVRRQLDPIWHTLGKRTKQLVSDLKTLRKLLDYLVRYDAVSFLKFLDTLRVAESYRSVWLFAESSYKIFDFAKKRVYRLIKASEVKSKEHVKNTSGKKRKLKGDSASVDAVGGATAKNGDSGVVIEEVLEEAPKWKVLREILLETQEEREKQTLSEEDNSDNNGMVLVACKDERSCMQLEDCITNNPHKVMREEWEMYLLSKIEIRNVQTPQKKKQKTPKGFGILDGVVPVTTIQSSEGSSVCRQEHEALMAAASSIRKLGKTTASENNNPEAQVDKASSTKGKAKKESSNLRRSIRSCSKKKTNSEPEIVVTGSENEEKVSEASTSDPREDSDVPPNGAKKLPPVHFYALESDQPILDVLKPSVIIVYHPDMSFVREIEVYKAENPLKKLKVYFLFYDESTEVQKFEASIRRENGAFESLIRQKSSMMIPVDQDGLCMGSNSSTEYPASSTQNSLTRKAGGRKEIEKETQVIVDMREFMSSLPNVLHQKGMKIIPVTLEVGDYILSPSICVERKSIQDLFQSFTSGRLFHQVEMMSRYYRIPVLLIEFSQDKSFSFQSANDISDDVTPYNIISKLSLLVLHFPRLRILWSRSLHATAEIFTTLKSNQDEPDETRAIRVGVPSEEGIIENDIRAENYNTSAVEFLRRLPGVSDANYRSIMEKCKSLSELASLPVEELAEVMGGQKVAKSLREFLDAKYPTLL